Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914472.1_cds_XP_016464450.1_57486
CDS Infomation

[gene=LOC107787401] [db_xref=GeneID:107787401] [protein=ATP-dependent DNA helicase PIF1-like] [protein_id=XP_016464450.1] [location=7332..8810] [gbkey=CDS]
Sequence

ATGAAGTTGTCATTGTACACAGCTAAAACAGCCTACAGGTTCTTGAGCTCCAAAGCTACA
TGTTGGTCTCAAGCTACTGCAAAAAGCAAGGTAAAACTCACAAGCCCTAAAAAGCCTAGA
GTAAAGTTAACTGACCAACAAAATCAAATCTTGGAAGCCATTTCAAATGGGAATTCTGTT
TTCATTACTGGGTCTGCAGGCACTGGAAAAACCTATTTACTTCAGGATATCATCACTAAA
CTTAGGAAGATTCATGGGAAATCTCGGGTTTTCGTGACAGCCTCAACTGGGGTTGCTGCT
TGTTCCATCAATGGACAAACACTTCATTCTTTTGCTGGAATTGGACTTGGTGATGCTAGT
GATGTGGATTTGCTCTCTAGGGTTACATTGGATAAGAGAGCGTATCGAAGATGGAATAAA
GTTAGGGCCTTGGTTATTGATGAAATTAGCATGATTAGTGGTGAGGTTTTTGATAATCTT
GAGTTCATTGCAAGGAGCATTAGAAGTGATGAACTTGGGTGTGAGGACAAGATTTGGGGT
GGGATACAACTAGTTGTGAGTGGAGACTTCTTTCAGCTTCCACCAGTTATCAATAAGAAG
GGACAAAACAAGGAATTTGCTTTTGAAGCTGAGTGTTGGAATGCTAGTTTTGACATGCAA
ATTGAGCTTAAAACTATCTTTAGGCAATCAGATGCACAACTGATAAAACTGCTGCAGGGG
ATTAGGAAAGGGAAGTATGATTCTGAGGATTTGCAGCTCTTGGATCAATGCTGCTCAGAG
GTTGAGCCAGATGCTTCAGCTGTTCAGCTTTACCCAAGAATTGAGGATGTCAGCAGAGTG
AATGCCGATCGACTCGACCGTTTAGACGAGGTGCTATTTCATTATCAAGCTCTTGACAGT
GGTAAGGATCCTTGGAAGAAGCAACTTAAGAATGGAATTGCACCTGAGTTGCTCAAATTA
TGTGTAGGAGCTAGGGTGCTTTTGACAAAGAACATTGATGTTATTGGTGGACTTGTGAAT
GGTGCCACTGGTACAATCTTAGATTTTGCTGTTGTTCCAGATTCCCATAAATTGTATGAC
CATGAAATTTCTGACATTTGCATAAATGGCAACCTGCTACCTGTTGTTAAATTTGATTCT
GGGCAAGAATTGATGATTGGTCTAGAAAAATGGTATGTAATGGATGGAGATGAAGCTGTT
GCCATGCGAAAGCAAATTCCCCTAATACTGGCTTGGGCTCTAAGCATTCATAAATGTCAA
GGAATGACTCTAAACAACCTCCATACAGATCTCTACCGGGTTTTTGGCTTTGGGATGGTA
TATGTTGCTCTTTCGCGCGTTAAAAGCTTGGATGGCCTTCATCTAGTCAATTTCAACCCG
TCAAAGATCAAGGCGCACCCCAAGGTTTTGCAGTTCTATCAAAGGCTGTCTGGTGAGAAA
GATGAACTAAAAGAAGATGCTGTATCTGATGAGAATTAA

Peptide Sequence

PEP ID

XP_016464450.1
PEP Infomation

PREDICTED: ATP-dependent DNA helicase PIF1-like [Nicotiana tabacum]
Sequence

MKLSLYTAKTAYRFLSSKATCWSQATAKSKVKLTSPKKPRVKLTDQQNQILEAISNGNSV
FITGSAGTGKTYLLQDIITKLRKIHGKSRVFVTASTGVAACSINGQTLHSFAGIGLGDAS
DVDLLSRVTLDKRAYRRWNKVRALVIDEISMISGEVFDNLEFIARSIRSDELGCEDKIWG
GIQLVVSGDFFQLPPVINKKGQNKEFAFEAECWNASFDMQIELKTIFRQSDAQLIKLLQG
IRKGKYDSEDLQLLDQCCSEVEPDASAVQLYPRIEDVSRVNADRLDRLDEVLFHYQALDS
GKDPWKKQLKNGIAPELLKLCVGARVLLTKNIDVIGGLVNGATGTILDFAVVPDSHKLYD
HEISDICINGNLLPVVKFDSGQELMIGLEKWYVMDGDEAVAMRKQIPLILAWALSIHKCQ
GMTLNNLHTDLYRVFGFGMVYVALSRVKSLDGLHLVNFNPSKIKAHPKVLQFYQRLSGEK
DELKEDAVSDEN

Transcript Sequence

Gene sequence data has not been registered.